Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNINNRIGIYPGTFDPITFGHIDIIKRACKLVDRLIIGVAENINKHTTFDAKLRTSMAENEIKRLEIDVDVVSFNGLLVKFAKEQNASVIIRGLRAVSDFDYEFQMSWVNYKLLPEIETIFLPASEDTQFISSSFVKEIARLGESVSKFVSVGVQKELINLNRIGSE
4NAU Chain:B ((1-155))
--MEHTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNSKKEGTFSLEERMDLIEQSVKHLP-NVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRADISEFVPPYVEKALKKKFK----
General information:
TITO was launched using:
RESULT:
Template:
4NAU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101391 for 1152 contacts (-88.0/contact) +
2D Compatibility (PS) -16046 + (NN) -1860 + (LL) 552
1D Compatibility (HY) -15600 + (ID) 3400
Total energy: -137745.0 ( -119.57 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_4NAU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NAU-query.scw
PDB file :
Tito_Scwrl_4NAU.pdb
: