Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNLESLP--KHLAIIMDGNSRWANSQGRVKIDGYRKGSEVAYDIAKHCIALAIPYLTLYAFSMENWLRPKEETDCLFDLFYSILTDRDKVNFFHNYNIKLNFVGNLSLLPGKILNQIKESEEMTRKNDGLLLTVAVSYGAKQEIIHAVRNITRK------NIDCVSEDEFEKFLYTKDLPKLDLLIRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLSKALEDYTKREKRYGR
2E9C Chain:B ((17-239))
--------GCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSS----------SALMELFVWALDS--EVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANR------
General information:
TITO was launched using:
RESULT:
Template:
2E9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133581 for 1529 contacts (-87.4/contact) +
2D Compatibility (PS) -21838 + (NN) -3857 + (LL) 1544
1D Compatibility (HY) -14000 + (ID) 4250
Total energy: -175982.0 ( -115.10 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_2E9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E9C-query.scw
PDB file :
Tito_Scwrl_2E9C.pdb
: