Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGGYITMETLNSINIPKRKEDSHKGDYGKILLIGGSANLGGAIMLAARACVFSGSGLITVATHPTNHSALHSRCPEAMVIDINDTK-MLTKMIEMTDSILIGPGLGVDFKGNNAITFLLQNIQPHQNLIVDGDAITIFSKLKPQLPTCRVIFTPHLKEWERLSGIPIEE---QTYERNREAVDRLGATVVLKKHGTEIFF-KDEDFKLTIGSPAMATGGMGDTLAGMITSFVGQFDNLKEAVMSATYTHSFIGENLAKDM--YVVPPSRLINEIPYAMKQLES |
3RPZ Chain:A ((5-279)) | NVPFWTEE-HVRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEATYWRDGWKKAADAQLEETYRAIAIGPGLPQTESVQQAVDHVLT---ADCPVILDAGALAKRTY--PK-REGPVILTPHPGEFFRMTGVPVNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHEDPKHAVLNAVYLHGACAELWTDEHSAHTLLAHELSDILPRVWKRFE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164004 for 2447 contacts (-67.0/contact) +
2D Compatibility (PS) -28294 + (NN) -5019 + (LL) 684
1D Compatibility (HY) -8400 + (ID) 4050
Total energy: -209083.0 ( -85.44 by residue)
QMean score : 0.574
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