Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGG-SNGL-HKDVLQR--SNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAYHK
3O7B Chain:A ((166-228))
---------------------------------------------------------------------GRDVLLFREKGGRFEFSELLD----------GDVAVCIGAFPHGDFFEETLRELGEFKEVSLGTESYTSLYVT---------------------
General information:
TITO was launched using:
RESULT:
Template:
3O7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30613 for 297 contacts (-103.1/contact) +
2D Compatibility (PS) -6333 + (NN) -1928 + (LL) 9056
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -33468.0 ( -112.69 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_3O7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O7B-query.scw
PDB file :
Tito_Scwrl_3O7B.pdb
: