Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDNLSLFIDYINDNIIYGSEIKREKLENLFNQFAIKNVEKNIVYDELKSLDITIIESQDSYKNKLKRLFSVLLQSKKI
4PZE Chain:F ((54-101))
---------------------IKKEKLTEADKASALARIKGSTSYDDLKATDIVIEAATENYDLKVKIL----------
General information:
TITO was launched using:
RESULT:
Template:
4PZE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5485 for 184 contacts (29.8/contact) +
2D Compatibility (PS) -4994 + (NN) -1020 + (LL) 2144
1D Compatibility (HY) -1600 + (ID) 850
Total energy: -835.0 ( -4.54 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_4PZE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PZE-query.scw
PDB file :
Tito_Scwrl_4PZE.pdb
: