Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MLMEKILYQTDEFKLKPSGWYKTIPPKKDGGTEFEIMLSGPIAFTDRFIDPATRKEKVFLSDLNNIELV----EKASILTALQLPSLI-EYGFTINEKHIRDLGF-VLQQMRST--TPLSTIYS-------GVGMLHTLLGPLISL--DQPYFSNEITNSTSIICDNKY---DLIPKGNLSEWLQMYKEEVHGNLSLELDVLFGVSSLVTAFLKYHNNVEFSGTIFSFTGQSS-------TGKSTAAMLAASVAGNPTK-----GTENLFRSWNATRNALEGYLSGNYGVPIVLDELSAATFH-DTTGLLYSFAEGQGRQRANINGDVKTPKN-- |
4TXD Chain:A ((21-369)) | KRDVLAELGLGDLRPYLRSIGDKDRIFPKAH-RIEVVFLVRAANYLLLRTEGAGTINMTTLEYSGGAMEVPVIQPQKLMAVTRRQMLQLLREYRDSLDEVSKRWLVQEVIGKAKDLGFKKVSEEWNCTIQGMDGFCPHCTIFGAALTEQHNEKFGGLSIGIKTRVRFDPAFATQRRITPETHNKVTEGHLSMTGQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYGTVRVEILGVKAGKYASTTAYDLAAENAGKGYEEVKKNLKERLEKLGFTPVDNSKLLAAVDHKDPNGLFKDLWRSSIDFAEKMVKWVEELKGGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67822 for 2231 contacts (-30.4/contact) +
2D Compatibility (PS) -31170 + (NN) -377 + (LL) -172
1D Compatibility (HY) -3200 + (ID) 2600
Total energy: -105341.0 ( -47.22 by residue)
QMean score : 0.263
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