Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKSIYNFQETNTNFLENLESLNDDNYELLNDKELVSDSNELKLISKVYIRKKDKKLLDWQLLIKNVYLDTEEDDNLFSESGHHFDAILFLKEDTTLQNNVYII-------PFGQAYHDIN-NLIDYDFGIDFAERAIKNED-IVNKNVNF---FQQNRLKEIVNYRR-NSVDYVRPSESYIS-V-QGHPQNPQIFGKTMTCGTSISLRV-PNRKQQFIDKI-SVIIKEINAIINLPQKISEFPRIVTLKDLNKIEVLDTLLLKKLSNSSTTENISIDISRFLEL-SNMILLLDDMLDVNIYINSFKNNTLETFDATDPEVDYITEIGDYLLKYDVNSINDVRIEVIDNLGHSNNMLLKTILHAEVEMEDGKKYLLQNGKWGYFNREFF-DLLNDHLNEIEIRYNTLTPTGLVFKEGEEGYIKEIVGRLPEEYLMLHKKFIKPINKNFIVKGNGIELADLYNIKNKELFT-IKRGINTSLSLYSLEQNIIAINALKYPESYNFEELIEAIPDN-SENIFNDIQRSTNFSIVWILPISSIDNMPIKDMVHTSNVINKNFQLTNLGSVLLKNKLVEWSLYLKDQRINPIIYMETPTEDRN |
| 4GQA Chain:A ((25-412)) | ------------------------------------------------------------------------------------------------ARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQIIARGDIGEPVRFRGTFDQGFYNDPNLPWSWRCSKTLGGSGALGDLGAHTLSVAQFLLGGIREVTASAQTCLRQRPVPDAEWREVENDDQVQCLVNFDSGAAGVIEASRIAAGR-----IFGVFWEVSGTEG---------------TLYMD--GERFNELQVYRFN-------DDKHDRGFKTLYAGSQIPAYAGFF---------GFDFGGGGLGYFDVKVIEVHDLVQGICGDDDCYPN---------------FEFGLQNQRVLSAIEASMVSRRWVNVVKD------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64180 for 2963 contacts (-21.7/contact) +
2D Compatibility (PS) -36002 + (NN) 9930 + (LL) 15460
1D Compatibility (HY) 2800 + (ID) 2200
Total energy: -74192.0 ( -25.04 by residue)
QMean score : 0.175
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