Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIPPQRQLAIQYNVNRVTIIKSIELLEAEGFIYTKVGSGTYVNDYLNEAHITNKWSEMMLWSSQQRSQYTVQLINKIETDDSYIHISKGELGISLMPHIQLKKAMSNTASHIEDLSFGYNNGYGYIKLRDIIVERMS-KQGINVGR-ENVMITSGALHAIQLLSIGFLGQDAIIISNTPSYIHSTNVFEQLNFRHIDVPYNQINEINTIIDRFINF---KNKAIYIEPRFNNPTGRSLTNEQKKNIITYSERHNIPIIEDDIFRDI-FFSDPTPAIKTYD-KLGKVIHISSFSKTIA-PAIRIGWIVASEK-IIEQLADVRMQIDYGSSILSQMVVYEMLKNKS-YDKHLVKLRYVLKDKRDFMLNILNNLFKDIAHWEVPSGGYFVWLVFKID-IDIKYLFYELLSKEKILINPG-YI-YGSKEKSIRLSFAFESNENIKHALYKIYTYVKKV |
| 1GD9 Chain:A ((26-385)) | ---------------------------------------------------------------------------------KDVISLGIGEPDFDT--PQHIKEYAKEALDK---GLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRAL-IINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA-PSWIIERMVKFQMYNATCPVTFIQYAAAKALK-DERSWKAVEEMRKEYDRRRKLVWKRLNE-MG--LPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKA-GEGYVRISYATA-YEKLEEAMDRMERVLKE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207989 for 3166 contacts (-65.7/contact) +
2D Compatibility (PS) -37833 + (NN) -18569 + (LL) 7380
1D Compatibility (HY) -15200 + (ID) 3650
Total energy: -275861.0 ( -87.13 by residue)
QMean score : 0.482
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