Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMG-TTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWT-QKPKFEYIKN--DLKDTKIVGQEPAPNLEEISKLKPDLIVASKVRN---EKVYDQLSKIA-PTVSTDTVFK-FKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFR-ADHTR-IYA-GGYAGEILNDLGFKRNKDLQKQVDN--GKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQSK |
| 3R5T Chain:A ((3-292)) | ---------------------------------NVWPRTFQNADGSITTIPSQPKRILSTAVTVTGTLLAIDAPVIASAATTQSTFFE--QWRKLAELRQVKKLWPAGSVDLESVYVEQPDLIVVSMIGADSARDQIPLLQA-IAPTILVDYSDQTWQSLAQQLGLATGLEEQAERTIHNFEQWTKQVRDVLDL-P-K---GRANIVSYHGPGVVNAVAKAQSAHAQLLQSVGVVLEEPDPAWQAGSIVHRDFLRIHYEHLTQLQAETTFLITMTDQ---------QAQAFLHDPILKNLPSIQRKQVY-GLGENSF-RIDLF-SAREIINSLLRRFAGEQAQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27249 for 2256 contacts (-12.1/contact) +
2D Compatibility (PS) -29335 + (NN) -9698 + (LL) 3936
1D Compatibility (HY) -8000 + (ID) 2300
Total energy: -72646.0 ( -32.20 by residue)
QMean score : 0.463
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