Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQSIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMASLQNLSVVEIQLWSGIAIAAPAVTTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMALCTTPLQFVLVRLLQGLFGGVVDASSAFASAEAPAEDRGKVLGRLQSSVSAGSLVGPLIGGVTASILG--------FSALLMSIAVITFIVCIFGALKLIETTHMPKSQTPNINKGIRRSFQCLLCTQQTCRFIIVGVLANFAMYGMLTALSPLASSVNHTAIDDRSVIGFLQSAFWTASILSAPLWGRFNDKSYVKSVYIFATIACGCSAILQGLATNIEFLMAARILQGLTYSALIQSVMFVVVNACHQQLKGTFVGTTN----SMLVVGQIIGSLSGAAITSYTTPATTFIVMGVVFAVSSLFLICSTITNQINDHTLMKLWELKQKSAK |
| 4BWZ Chain:A ((3-386)) | --GAEHLLEIFYLLLAAQVCAFIFKRLNQP----------------------VVIGEVLAGVLVGPALLGLVHEG---EILEFLAELGAVFLLFMVGL-ETRLKDILAVGKEAFLVAVLGVALPFLGGYLYGLEIG--FETLPALFLGTALVAT-SVGITARVLQELGVLSRPYSRIILGAAVIDDVLGLIVLACVNGVAETGQVEVGAITRLIVLSVVFVGLAVFLSTLIARLPLERLPVGSPLGFALALGVGMAALAASIG--LAPIVGAFLGGMLLSEV------REKYRLEEPIFAIESFLAPIFFAMVGVRLE-------LSALASPVVLVAGTVVTVIAILGKVLGGFLGALTQGVRSALTVGCGMAPRGEVGLIVAALGLKAGAVNEEEYAIVLFMVVFTTLFAPFALKPLIAWTERERAAKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -297813 for 3386 contacts (-88.0/contact) +
2D Compatibility (PS) -38293 + (NN) -4298 + (LL) 4900
1D Compatibility (HY) -23600 + (ID) 3200
Total energy: -362304.0 ( -107.00 by residue)
QMean score : 0.221
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