Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKLKLMTIVGTRPEIIR----LSSTIKACDQY-FNQILVHTGQNYDYTLNQIFFDDLELRQPDHYLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCLAAVSAKRLKIPVFHMEAGNRCF-D--QNVPEEINRKIV-DHVSDVNLPYTEHSRRYLLD-EGFNKANIFVTGSPMTEVIEAHRD-K-INHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKSLMNAINDIAKK-Y-KMPVIYSTHPRSWKKIEE--SKFEFDPLVKQLKPFGFFDYNALQKDAFVVLSDS-----GTLSEESSILKFPGVLIRTSTERPEVLDKGTVI-V-GGI-TYNNLIQSVELAREMQNN-NEPMI----DAIDYKDTNVSTKVVKIIQSYKDIINRNTWRK |
| 2IW1 Chain:A ((2-370)) | ----IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGD--CPK-AFELIQVP--VKSHTN-----HGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPG-IYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFG---RKGVDRSIEALASLPESLRHNTLLFV-VGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAV-CGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIITG------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110265 for 2700 contacts (-40.8/contact) +
2D Compatibility (PS) -35986 + (NN) -11147 + (LL) 1928
1D Compatibility (HY) -2400 + (ID) 1800
Total energy: -159670.0 ( -59.14 by residue)
QMean score : 0.298
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