Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILNIVSSNIVQDPRVLKQIETIKGV-TNDYKIVGMNNSQATN-R--RLENLDCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAFKPDVIHANDFD-VLLMVYLSNYK-KANIVYDAHEIYAKNAFINKVPLISKFV-ESIEKHIVKHRVNAFVTVSHAAKEYYQSKGYK-KEANVITN-APILNDSREF------KEIENFKEIVYQGQIVMDRGYEEFIIASSAFKQ--NAPSFIIRGFGPH--EEVIKELISYNSENIRLDKPVEVKELVDKLAESNVGVILTKPVSINFEYTVSNKIFECIHAGLPVILS-PVKEHIYLNEKYKFGIVLKE-VTPLEIEKAVRKLRDNHDLFNHLRQNAIKASKILNWQIESERLVELYKF |
| 1V4V Chain:A ((6-366)) | KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQ-ERQALPDLAA---RILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSGNLK--E-----PFPEEANRRLTDV-LTDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVL-KGVRNFVLLDPLEYGSMAALMRASLLLVTD------S-----GGLQEEGAALGVPVVVLRNVTERPEGLKA---GILKLAGTDPEGVYRVVKGLLENPEELSRMRKAKNPYGDGKAGLMVARGVAWRLG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106242 for 2850 contacts (-37.3/contact) +
2D Compatibility (PS) -36349 + (NN) -6943 + (LL) 2360
1D Compatibility (HY) 3200 + (ID) 2000
Total energy: -145974.0 ( -51.22 by residue)
QMean score : 0.359
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