Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHI-NVDVMCGWPYEYSNHKQVSKT-EMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYN---DTFKA----YR--EQYDKILLYSGN--MGQLQDMETLISFLKLNKD-QPQTLTILC--GHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAIYNFINTH--SSKELHEMGERAHQLFKDKYTREINTMKYYNLLK |
| 3DZC Chain:A ((24-395)) | -AMKKVLIVFGTR-----PEAIKMAPLVQQLCQDNRFVAKVCVTGQHREM-LDQVLELFSITPDFDLNIMEPG-----QTLNG---VTSKILLGMQQVLSSEQPDVVLVHGDTAT-TFAASLAAYYQQIPVGHVEAGLRTGNIYS-------PW---PEEGNRKLTAALTQYHFAPTDTSRANLLQENYNA--ENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLK--GVSNIVLIEPQQYLPFVYLMDRAHIILTDS-----GGI----QEEAPSLGKPVLVMR-ETTERPEAVAAGTVK-LVG-TNQQQICDALSLLLTDPQAYQAMSQA-----HNPYGDGKACQRIADILA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224002 for 2942 contacts (-76.1/contact) +
2D Compatibility (PS) -36592 + (NN) -1940 + (LL) 2340
1D Compatibility (HY) -6000 + (ID) 2100
Total energy: -268294.0 ( -91.19 by residue)
QMean score : 0.366
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