Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGFSVYLGQP-LDEAYIKRMIKQGYQMIFTSVQIPEEDDETKYHYFTKLLNLLKYEQVTYLIDANPSILTPSFYEHLRQYDAQFMIRIDHSTSIEAIEAIMAQGLKCCLNA-----------SIISRELLTSLHQQLNDFTLLSFCHNYYPRPDTGLSVDLVNKKNELIYQFNPKAQIYGFIVGSGLRGPLHKGLPTIEATRHSHPVVAAKLLQETGVSEVLVGDSLIEMRQAKQLIDFCKHRHFTLCIEEVFDTTVTYLFDMCHKVRPDNPENVIRSETSRQICPHSIQPQFTTQRRIGSVTVDNLNNGRYQGEMQIVRQTLSAHDNVNVVAQIIKEDLPLLSCIEPNDTFDFQKTRECKK |
1S3I Chain:A ((1-307)) | --MKIAVIGQSLFGQEVYCQLRKEGHEVVGVFTIPDKDGKADPDGLEAEKDGVPVFKFPRW---RARGQALPEVVAKYQALGAELNVLPFCSQFI--PMEVINAPRHGSIIYHPSLLPRHRGASAINWTLIHG--DKKGGFTIFWA----DDGLDTG---DLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGT-----APRCPQSEEGATYEG------IQKKETAKINW--------------DQPAEAIHNWIRGNDKVPGAWTEACGQKLTFFNSTLNTSGLSTQGEALPIPGAHRPGVVTKAGLILF---GNDDRMLLVKNIQLEDGKMMPASQFFK------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S3I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122556 for 2354 contacts (-52.1/contact) +
2D Compatibility (PS) -31171 + (NN) -6465 + (LL) 4564
1D Compatibility (HY) -1200 + (ID) 1600
Total energy: -158428.0 ( -67.30 by residue)
QMean score : 0.202
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