Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MTTQMKIKTYLV--------AGIKAALLDTTGIKLASKSETTSHTYQ-----HQALVDQLHELIANTDLNKLSYLNLDAFQKRDILAAHYIAKSAIRTKNLDQMTKAKQRLESIYNSISNPLHSQNN
1BQG Chain:? ((12-143))
GAPVITDLKVVPVAGHDSMLLNLSGAHGPLFTRNILILTDSSGHVGVGEVPGGEGIRKTLEDARHLLINQSIGNYQSLLNKVRNAFADLRIAVHAVTAVESALLDLLGQHLQV----------PVAALLG
General information:
TITO was launched using:
RESULT:
Template:
1BQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -831 for 720 contacts (-1.2/contact) +
2D Compatibility (PS) -11132 + (NN) -2711 + (LL) 536
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -18538.0 ( -25.75 by residue)
QMean score : 0.244
(partial model without unconserved sides chains):
PDB file :
Tito_1BQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BQG-query.scw
PDB file :
Tito_Scwrl_1BQG.pdb
: