Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------MASLKNKHFMIGLSLTFIVALFSFLAA------------KLPILDKVGALTIAILIA------ILYRHFRGYPEQYSSGITFSSKYLL-RFAIILYG-------LKLNIFDIIGQGSKLLAIDVGVVIFSIVMMLFVNKLLHGDKNIALLLGVG------TGVCGAAAIAAVAPIFKSREKDTAISI-------GIIAL-------IGTIFSLIYTAIYAIFSM-------TTNVYGAWS---GVSL-------------------HEIAHVVLAG--GFGGSDALKIALLGKLGRVFLLIPLTIVLILIMRFRSSESSSKGRISIPYFLIG--------FVIMALVNTYVTIPSVLLNI--------LNTISTICLLM------AMVALGLN------VAFKDLKNRALKPLMTIII----------------TSICLSSLAFIVVHWLYS- |
4EWV Chain:A ((14-581)) | NETFEKQLKDLTSNVKSIQDNLLEEIITPDKELFKKNVSYEDIKPYLDRVVNGESQKMMPWNNKYLDNLTFIYDLRMQVITKHVKGVEMMFLFTKQEPARVATSSYFKSDYFKNRPSNWYYSYTSPDEVILCPNNTESLYCHLLCGLVQRGSIFASVMVRAIEVLKNSWEELCSNIRSGHLSNWVTDLGCQNSVSLVLGGPRPELADTIEEICNQNSWKGIVKRLWPNTKYIETVVTGSMGQYVPMLNYYCNDLPLVSTTYGSSETTFGINLDPLCKPEDVSYTFMPNMSYFEFIGCTYAGLYRMRVGDIVLVTGFYNNAPQFKFVRRENVVLSIDSDKTNEEDLFKAVSQAKLVLESSGLDLKDFTSYADTSTFPGHYVVYLEVDTKQFELDEEALSTCCLVMEESLDNVYKRCRFKDGSIGPLEIRVVRQGTFDSLMDFFISQGASTGQYKTPRCIKSGKALQVLETCVVAKFFSI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232310 for 2116 contacts (-109.8/contact) +
2D Compatibility (PS) -34275 + (NN) 8722 + (LL) 0
1D Compatibility (HY) -18400 + (ID) 2950
Total energy: -279213.0 ( -131.95 by residue)
QMean score : -0.041
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