Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWSFKSMFNTPEDPEKDAYEFYGKVQPGITT-PTQKTCNFVALDLKSKDRDAIKAMFKKWT-VMADRMMDGDTVGKTSNNPLMPPVDTGESIGLGASKLTITFGISKSLMKKIGLSSKIPDAF-KDLPH--------FPN--DQLIDD--YSDGDIMIQACSNDSQVSFHAVHNLVRPFRDIVKVRWAQSGFISAKGKETPRNLMAFKDGTINPRKSNQ-----------LKDYVFID--------DGWAKHGTYCVVRRIQIHIETWDRT------------ALEEQE-------ATFGRKRHSGAPLTGGKEFDEIDLK------------AKDSHGEYIIDKDAHTRLAKEA--------NTSILRRAFNYVDGTDDRT-----GNFETGLLFIAFQKAT-KQFIDIQNNLG-------------SN-----------------------DKLNEYITHRGSASFLVLPGVSKGGYLGETLFD |
| 3VXJ Chain:A ((5-439)) | ------------------ILPLNNIQGDILVGMKKQKERFVFFQVNDA--TSFKTALKTYVPERITSAAILIS------------------DPSQQPLAFVNLGFSNTGLQALGI---TDDLGDAQFPDGQFADAANLGDDLSQWVAPFTGTTIHGVFLIGSDQDDFLDQFTDDISSTFGSSITQVQALSGSARPGD-QAGHEHFGFLDGISQPSVTGWETTVFPGQAVVPPGIILTGRDGDTGTRPSWALDGSFMAFRHFQQKVPEFNAYTLANAIPANSAGNLTQQEGAEFLGARMFGRWK-SGAPIDLAPTADDPALGADPQRNNNFDYSDTLTDET-RCPFGAHVRKTNPRQDLGGPVDTFHAMRSSIPYGPETSDAELASGVTAQDRGLLFVEYQSIIGNGFRFQQINWANNANFPFSKPITPGIEPIIGQTTPRTVGGLDPLNQNETFTVPLFVIPKGGEYFFLPSISALTAT------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67379 for 2527 contacts (-26.7/contact) +
2D Compatibility (PS) -34044 + (NN) -9959 + (LL) 1408
1D Compatibility (HY) -7200 + (ID) 2750
Total energy: -119924.0 ( -47.46 by residue)
QMean score : 0.286
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