Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLAEAGRTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPP-IPGHYDGVGIEIVRENK
1SQL Chain:H ((21-139))
-GDKLILKGLKFYGFHGAIAEERTLGQMFLVDIDAWVSLKKAGESDNLEDTISYVDIFSLAKEIVEGSPRNLLETVAELIASKTLEKFHQINAVRVKLSKPNVALIKSTIDYLGVDIFRQ--
General information:
TITO was launched using:
RESULT:
Template:
1SQL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59118 for 847 contacts (-69.8/contact) +
2D Compatibility (PS) -12918 + (NN) -5157 + (LL) 192
1D Compatibility (HY) -12000 + (ID) 2300
Total energy: -91301.0 ( -107.79 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_1SQL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SQL-query.scw
PDB file :
Tito_Scwrl_1SQL.pdb
: