Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNDIYFMTLAIEEAKKAAQLGEVPIGA--IITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLRANKKSTN
1UAQ Chain:B ((15-111))
-------MDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTLENCGRLEGK-VYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGEN-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UAQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37130 for 723 contacts (-51.4/contact) +
2D Compatibility (PS) -10378 + (NN) -4899 + (LL) 3236
1D Compatibility (HY) -6800 + (ID) 2000
Total energy: -57971.0 ( -80.18 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_1UAQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UAQ-query.scw
PDB file :
Tito_Scwrl_1UAQ.pdb
: