Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINKDIYQALQQLIPNEKIKVDEPLKRYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLSL-DHIDVSDDAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQGSLIKLTTKELELDYRNSIIQKEHLVVLEAAFTLAPGKMTEIQAKMDDLTERRESKQPLEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYENLIHYVQKTVKEKFGIELNREVRIIGEHPKES |
| 2GQT Chain:A ((4-267)) | -----------------MRVERVLLKDYTTLGVGGPAELW-TVETREELKRA------TEAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTY---DLKGWVGAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALEAVEVFH-DGAFHVYCPEELGFGYRKSHLPP-GGIVTRVRLKLKERPKEEILRRMAEVDRAR-KGQP-KRKSAGCAFKNPPGQSAGRLIDERGLKGLRVGDAMISLEHGNFIVNLGQARAKDVLELVRRVQEE----LPLELEWEVW--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121002 for 2182 contacts (-55.5/contact) +
2D Compatibility (PS) -27841 + (NN) -5341 + (LL) 3852
1D Compatibility (HY) -12800 + (ID) 4300
Total energy: -167432.0 ( -76.73 by residue)
QMean score : 0.625
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