Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLE-----DMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKE----TRRAHPLMEQGKR--SLINAINDEREHLSQIRSIANFVID--TTKLSPKELKERIRRYYEDEE-FETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK |
| 3D31 Chain:A ((16-202)) | LDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSP----------EKHDIAFVYQNYS--LFPHM-NVKKNLEFGMRM--KKIKDPKRVLDTARDLKIEHLLDRNPLTLSGGEQQRVALARALVTNPKIL---------LLDEPLSALDPRT-QENAREMLSVLHKKNKLTVLHITHDQT-EARIMADRIAVVM-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2988 for 1221 contacts (-2.4/contact) +
2D Compatibility (PS) -18331 + (NN) -3139 + (LL) 9344
1D Compatibility (HY) -6000 + (ID) 1650
Total energy: -22764.0 ( -18.64 by residue)
QMean score : 0.183
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