Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVVVSSLSSSANASQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENANKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLR-KSEAQAKKEKLNIWSEDNADSGQ
1STY Chain:A ((6-142))
------------------------------------------------------------------------------------KLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRGKSEAQAKKEKLNIWS--------
General information:
TITO was launched using:
RESULT:
Template:
1STY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42046 for 1089 contacts (-38.6/contact) +
2D Compatibility (PS) -14384 + (NN) -2669 + (LL) 5904
1D Compatibility (HY) -15600 + (ID) 6700
Total energy: -75495.0 ( -69.33 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_1STY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1STY-query.scw
PDB file :
Tito_Scwrl_1STY.pdb
: