Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFISNNNITDPTLNLAMEEYVLKNLPA-EESYFLFYINRPSIIVGKNQNTIEEVNQTYIDAHNIDVVRRISGGGAVYHDTGNLNFSFITDDD-GNSFHNFQKFTEPIVQALQSLGVNAELTG----------RNDIQVGQAKISGNAMVKVKNRMFSHGTLMLNSDLDEVQNALKVNPAKIKSKGIKSVRKRVANIQEFLNDPLEIEEFKKIILKTIFGETEVE--EYKLTDEDWENIEKLSNDKYRTWAWNYGRNPKYNFEREEKFEKGFVQIKFDVKRGKIEHAKIFGDFFGVGDVTDLENALVGCLHDFEHIEEALSEYDLYHYFGDIDRHELIRLMS |
| 2C8M Chain:A ((4-256)) | RLLLL-ETPGNTRMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK---------------ERVANVTDFV--DVSIDEVRNALIRGFSETLHIDFREDTITEKEESLARELFDKKYSTEEWNMGL-------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97759 for 1859 contacts (-52.6/contact) +
2D Compatibility (PS) -23599 + (NN) -6897 + (LL) 6412
1D Compatibility (HY) -15600 + (ID) 3350
Total energy: -140793.0 ( -75.74 by residue)
QMean score : 0.570
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