Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRNTNKFLLIPYLLWMVIFIIVPVVLLIYFSFLDIN------GHFSFTNYQQIFTTK-----YLKMFAYSILYAALITIITLAISYPAAYYITRSKF--QNILLMIMIIPTWINLLLKTYAFIGLLSHD-GVINQFFHLFNLPSFNLL----FTTGAFLVVASYIYIPFMILPIFNSMKAIPNNLLQASSDLGASPFYTFRKVIMPLTKEGVMTGIQVTFIPSLSLFMITRLIAGNKVINIGTAIEEQFLTIQNYGMGSTIAIFLIVFMAFILIITKSSNGRG----------------- |
| 2R6G Chain:F ((13-504)) | DALKWSVLGLLGLLVGYLVVLMYAQGEYLFAITTLILSSAGLYIFANRKAYAWRYVYPGMAGMGLFVLFPLVCTIAIAFTNYSSTNQLTFERAQEVLLDRSWQAGKTYNFGLYPAGDEWQLALSDGETGKNYLSDAFKFGGEQKLQLKETTAQPEGERANLRVITQNRQALSDITAILPDGNKVMMSSLRQFSGTQPLYTLDGDGTLTNNQSGVKYRPNNQIGFYQSITANWGDEKLSPGYTVTTGWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGT----------TTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R6G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244578 for 1688 contacts (-144.9/contact) +
2D Compatibility (PS) -26369 + (NN) -3461 + (LL) 1360
1D Compatibility (HY) -16000 + (ID) 2200
Total energy: -291248.0 ( -172.54 by residue)
QMean score : 0.196
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