Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYL----EDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE
1KU3 Chain:A ((370-428))
---------------EKALSK-LSEREAMVLKMRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKLKYHES---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1KU3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19656 for 344 contacts (-57.1/contact) +
2D Compatibility (PS) -5650 + (NN) 2084 + (LL) 5144
1D Compatibility (HY) -400 + (ID) 400
Total energy: -18878.0 ( -54.88 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_1KU3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KU3-query.scw
PDB file :
Tito_Scwrl_1KU3.pdb
: