Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIDYLTLFPEMFDGVLNHSIMKRAQENNKLQINTVNFRDYAINKHNQVDDYPYGGGQGMVLKPEPVFNAMEDLDVTEQTRVILMCPQGEPFSHQKAVELSKADHIVFICGHYEGYDERIRTHL----VTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNEQSHQDDSFSD-GLLEFPQYTRPREFKGLTVPDVLLSGNHANIDAWRHEQKLIRTYNKRPDLIEKYPLTNEDKQILERYKIGLKKG
3QUV Chain:A ((5-231))
MKIDVVTIFPEYLQ-PVRQSLPGKAIDAGLVDVAVHDLRRWTHDVHKSVDDSPYGGGPGMVMKPTVWGDALDEICT-SETLLVVPTPAGYPFTQETAWQWSTEDHLVIACGRYEGIDQRVADDAATRMRVREVSIGDYVLNGGEAAALVIIEAVLRLVPGVLGN-----------ASLLEGPSYTRPPSWRGMDVPPVLLSGDHAKIAAWRAEQSRQRTIERRPDLL-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3QUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117414 for 1489 contacts (-78.9/contact) +
2D Compatibility (PS) -22738 + (NN) -11128 + (LL) 1472
1D Compatibility (HY) -18400 + (ID) 4650
Total energy: -172858.0 ( -116.09 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3QUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QUV-query.scw
PDB file :
Tito_Scwrl_3QUV.pdb
: