Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDMGKAYEATVSIGRSTTTEDQTGDTLETKGVHSADFNKDDIDRLLENFKGVIEQIPPMYSSVKVNGKKLYEYARNNETVERPKRKVNIKDIGRISELDFKENECHFKIRVICGKGTYIRTLATDIGVKLGFPAHMSKLTRIESGGFVLK-DSLTLEQIKELH-------EQDSLQNKLFPLEYGLKGLPSIKIKDSHIKKRILNGQKFNKNEFDN-----KIKDQIVFIDDDSEKVLAIYMVHPTKESEIKPKKVFN |
| 3U28 Chain:A ((58-318)) | -SSGVINLDKPSNPSSHEVVAWIKRILRCEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQGAGKEYVCIVRLHDAL-------------------KDEKDLGRSLENLTGALFQRPP-----KRQ-----------------LRVRTIYESNLIEFD---NKRNLGVFWASCEAGTYMRTLCVHLGMLLGVGGHMQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRSIIQPLETLLVGYKRIVVKDSA-VNAVCYGAKLMIPGLLRYEEGIEL-YDEIVLITTKGEAIAVAIA--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137191 for 1882 contacts (-72.9/contact) +
2D Compatibility (PS) -25664 + (NN) -7632 + (LL) 3256
1D Compatibility (HY) -11600 + (ID) 3650
Total energy: -182481.0 ( -96.96 by residue)
QMean score : 0.519
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