Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVSYVLEQL-DAPVYGSKLTIALIKENMKARNI---------D--------KKVRYYTVNNDSIMRF-KNVNISFFNTTHSIPDSLGVCIHT--SYGAIVYTGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAK---VRGRLIVSCYASNFIRIQQVLNIASKLNR-------KVSFLGRSLESSFNIARK-MGYFDIP---------KDLLI-------P-ITEVDNY-PKNEVIIIAT-GM--QGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVII-A------NTLN-----ELVRAGAHIIPNNKKI-HASSHGCMEELKMMINIMK--PEYFIPVQGEFKMQIAHAKLAA-EAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI |
| 2YCB Chain:A ((178-636)) | --------DWARLTAMGGFREVGRSCLYLQTPNSRVLLDCGVNVAGGDD---KNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGH-ILGSAMAHLHIGDGQHNMVYTGDFKYEQSRLLEAA-----ANR--FPRIETLVMESTYGGHEDVQPSRNRAEKELVKTIYSTLRRGGKILIPVFA--VGRAQELMIVLEEYIRTGIIDEVPVYIDGMIWE-ANAIHTARPEYLSKDLRDQIFHMGHNPFISDIFHKVNGMDERREIVEGEPSIILSTSGMLTGGNSLEYFKWLCE--------DPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKDEDDKMRVYNVRMNIKT----IEGFSGHSDRRQLMEYVKRISPKPEKILLCHGDNYKTLDLASSIYRTYRI---ETKTPLNLETVRIQ---------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230788 for 3357 contacts (-68.7/contact) +
2D Compatibility (PS) -42353 + (NN) -12219 + (LL) 11724
1D Compatibility (HY) -13200 + (ID) 3500
Total energy: -290336.0 ( -86.49 by residue)
QMean score : 0.491
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