Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MYNKDDVLKQADNIAN----------KIKNLDTIKTYQQIEA--QIHQNQTIKTKMDMLKKHQKQAVNFQNYGK------QNALEQSEHTIQSIEAEINTLPIVEQFQTSQ-------------YEANQLLKMFVSTMETRLNDHNKAK--HSD- |
| 1EER Chain:A ((1-166)) | APPRLICDSRVLERYLLEAKEAEKITTGCAEHCSLNEKITVPDTKVNFYAWKRMEVGQQAVEVWQGLALLSEAVLRGQALLVKSSQPWEPLQLHVDKAVSGLRSLTTLLRALGAQKEAISNSDAASAAPLRTITADTFRKLFRVYSNFLRGKLKLYTGEACRTGDR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13210 for 886 contacts (14.9/contact) +
2D Compatibility (PS) -13190 + (NN) -6996 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -10926.0 ( -12.33 by residue)
QMean score : 0.481
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