Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKLNMNNEIKKVEQRL-----EKAIKSKDSVLEQASLHLLSSGGKRVRPAF---VILSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGN--FLLALGL----EHLMAVKDNRVHQLISES-IVDVCRGELFQFQDQFNSQQTIINYLRRINR-KTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHPKSLLLSLTKKMGSRNT |
| 4LFE Chain:B ((3-250)) | -------DKLKKIDQTIHAFYCEKAVISEK--LNEAVLYSINAGGKRIRPILFLEVIEALQI----PLTESHFKAAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAFGMLAETDFPTDVTVDLVRSLSSASGTFGMVGGQMLDMAAE--GKKLNLKNLQLIHRHKTGQLLAYPFWAAARVAQLDENLLATFLEIGMIIGLAFQVRDDILDITANFEEIGKTPKKDVMAEKMTYPHLLGLNES-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17372 for 1750 contacts (-9.9/contact) +
2D Compatibility (PS) -24613 + (NN) -10282 + (LL) 5676
1D Compatibility (HY) -16800 + (ID) 4100
Total energy: -67491.0 ( -38.57 by residue)
QMean score : 0.329
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