Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDR-LTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQP-IDLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH
3KRF Chain:D ((15-253))------------VNKALEAAVQMK-EPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIG-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3KRF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48696 for 1988 contacts (-24.5/contact) +
2D Compatibility (PS) -25985 + (NN) -16687 + (LL) 4084
1D Compatibility (HY) -19200 + (ID) 5050
Total energy: -111534.0 ( -56.10 by residue)
QMean score : 0.432

(partial model without unconserved sides chains):
PDB file : Tito_3KRF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KRF-query.scw
PDB file : Tito_Scwrl_3KRF.pdb: