Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSQELLAIAVDAIDNK-KGEDTISLEMKGISDM--TDYFVVTHGNNERQVQAIARAVKEVANEQNIEVKRMEGYNEARWILIDLADVVVHVFHKDERNYYNIEKLYQDAPLESYGQVAY |
2WP4 Chain:A ((69-127)) | ------LMSIIGRCEDKAEGVRVAVAHRTGELQIGDAAVVIGASAPHRAEAFDAARMCIELLKQE------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 342 for 328 contacts (1.0/contact) +
2D Compatibility (PS) -6390 + (NN) -4161 + (LL) 5104
1D Compatibility (HY) -400 + (ID) 350
Total energy: -5855.0 ( -17.85 by residue)
QMean score : 0.567
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