Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNANN-ADNKQFFSKILNSIG-AGVVIALVPNALLGEVLKIFKSG-NEILELTYQLVI-----LIQLFMAFIIGVL-----AAHQFKFNGAGAAIVGTSAMI-GSGAVVYSNNSF----MLKGIGDIINTSLVVIIACLIYMVLQNKLGSFELIILPVLVPIVSGGIGLITLPYIRKI----TQAIGNVIHSFTDLNPLLMSILISVAFSLLMV-TPI-SLVAIATAISLNG-LGSGAANLGIVAACVTFLFGSLRVNSIGVNAVLLIGAAKMMIP--------VYLKNLIISI----PLTINGIITGIIAYVLQVKGTPLSAGFG-YTGLVGP-------------------INAFNRMSGDPTMNIILLALGYFVIPFVSAFIV----------------HELCKKFIPIYSNDIYKFEVPKQ---- |
| 4N9N Chain:A ((11-438)) | NLNLIDMKLFHHYCTKVWPTITAAKVSGPEIWRDYIPELAFDYPFLMHALLAFSATHLSRTETGLEQYVSSHRLDALRLLREAVLEISENNTDALVASALILIMDSLANASVDNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLL-TKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS-LDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYVDSMSPSAWIFHVKGAATILTAVWPLSERSKFHNIISVDLSDLGDVINPDVGTITELVCFDESIADLYPVGLDSPYLITLAYLDKLHREKNQGDFILRVFTFPALLDKTFLALLMTGDLGAMRIMRSYYKLLRGFATEVKDKVWFLEGVTQVLPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -294829 for 2533 contacts (-116.4/contact) +
2D Compatibility (PS) -35137 + (NN) 1139 + (LL) 324
1D Compatibility (HY) -2800 + (ID) 3000
Total energy: -334303.0 ( -131.98 by residue)
QMean score : 0.218
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