Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIESIEHELEESIASLRQAGIRITPQRQAILRYLISS-HTHPTADEIYQALSPDFPNISVATIYNNLRVFKDIGIVKELTYGDSSSRFDFNT-HNHYHIICEQCGKIVDFQYPQLNEIERLAQHMTDFDVTHHRMEIYGVCKECQDK
2W57 Chain:A ((3-133))
-------------DNNQALKDAGLKVTLPRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELSTQHHHDHLVCLDCGEVIEFSDDVIEQRQKEIAAKYNVQLTNHSLYLYGKC------
General information:
TITO was launched using:
RESULT:
Template:
2W57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60006 for 838 contacts (-71.6/contact) +
2D Compatibility (PS) -14069 + (NN) -4271 + (LL) 1824
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -87622.0 ( -104.56 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_2W57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W57-query.scw
PDB file :
Tito_Scwrl_2W57.pdb
: