Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKTQIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVSQQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEIQDFKVPKGIEDHLFRITQEAISNTLRHSNG-TKVTVELF--NKDDYLLLRIQDNGKGFNVDE------------KLEQSYGLKNMRERALEIGATFHIVSLPDSGTRIEVKAPLNKEDSYDD |
3SL2 Chain:A ((34-153)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLYVEIDQDKITQVLDNIISNALKYSPEGGHVTFSIDVNEEEELLYISVKDEGIGIPKKDVEKVFDRFYRVDLGGTGLGLAIAKEMVQAHGGDIWADSIEGKGTTITFTLPYKE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10055 for 637 contacts (-15.8/contact) +
2D Compatibility (PS) -11192 + (NN) -4889 + (LL) 21712
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -9474.0 ( -14.87 by residue)
QMean score : 0.442
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