Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKLQDVIVQEMKVKKRIDSAEEIMELKQFIKNYVQSHSFIKSLVLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQKDADEVDQALRFIEPDEI--VTVNIKPAVDQSVQSLKEAGIVLTDFQ---KGNEKARERMKVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAYLGAPKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVTPEEQKVIENHYIRNAHKRELAYTRYTWPKS |
| 3FIU Chain:D ((6-246)) | ----------------DFSPKEYSQKLVNWLSDSCMNYP-AEGFVIGLSGGIDSAVAASLA-------VKTGLPTT--ALILPSDNNQHQDMQD-ALELIEMLNIEHYTISIQPAYEAFLASTQSFT------QLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEWYMGYFTKFGDGAADILPLVNLKKSQVFELGKYLDVPKNILDKAPSAGLWQGQ---TDEDEMGVTYQEIDDFLDGKQVSAKALERINFWHNRSHHKRKLALT------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -15999 for 1828 contacts (-8.8/contact) +
2D Compatibility (PS) -25097 + (NN) -9257 + (LL) 4280
1D Compatibility (HY) -15600 + (ID) 4300
Total energy: -65973.0 ( -36.09 by residue)
QMean score : 0.423
|
|
|