Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKRSLLFLTVLLLLFSFSSITNEVSASSSFDKGKYKKGDDASYFEPTGPYLMVNVTGVDSKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYK------EFRVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKVVIEKK |
2AV5 Chain:A ((17-65)) | ---------------------------------------------------------------------RYIAFKVISENQFNKDEIKEAIWNACLRTLGELGTAKAKPWLIKFDETT--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15084 for 180 contacts (-83.8/contact) +
2D Compatibility (PS) -4662 + (NN) 134 + (LL) 6892
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -15470.0 ( -85.94 by residue)
QMean score : 0.518
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