Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDSNQGLQANPQYTIHYLSQEITRLTQENAMLKAYIQEQNEKSKSAEEE
3LCN Chain:C ((4-28))
-------------------------TASKMKLLKKKIEEQREILQKTHHK
General information:
TITO was launched using:
RESULT:
Template:
3LCN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5729 for 90 contacts (63.7/contact) +
2D Compatibility (PS) -2773 + (NN) -1313 + (LL) 1444
1D Compatibility (HY) -400 + (ID) 300
Total energy: 2387.0 ( 26.52 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_3LCN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LCN-query.scw
PDB file :
Tito_Scwrl_3LCN.pdb
: