Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTVYYDQDVKTDALQG-KKIAVVGYGSQGHAHAQNLKDN----GYDVV--IGIRPG-RSFDKAKEDGFD-----VFPVAEAVKQADVIMVLLPDEIQGDVYKNEIEPNLEKHNALAFAHGFNIHFGVIQP-----PADVDVFLVAPKGPGHLVRRTFVEG-----SAVPSLFGIQQDASGQARNIALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGVSKLIQSGFETLVEAGYQPELAYFEVLHEMKLIVDLMYEGGMENVRYSISNTAEFGDYVSGPRVITPDVKENMKAVLTDIQNGNFSNRFIEDNKNGFKEFYKLREEQHGHQIEKVGRELREMMPFIKSKSIEK |
| 1YVE Chain:L ((49-278)) | ------------DAFKGIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETISGSDLVLLLISDSAQADNYE-KVFSHMKPNSILGLSHGFLL--GHLQSLGQDFPKNISVIAVCPKGMGPSVRRLYVQGKEVNGAGINSSFAVHQDVDGRATDVALGWSIALGSPF--TFATTLEQEYKSDIFGERGILLGAVHGIVECLFRRYTESGMSEDLAY-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98249 for 1592 contacts (-61.7/contact) +
2D Compatibility (PS) -22316 + (NN) -2603 + (LL) 8444
1D Compatibility (HY) -19200 + (ID) 3950
Total energy: -137874.0 ( -86.60 by residue)
QMean score : 0.431
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