Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNILVIGANGGVGSLLVQQLAKENVPFTAGVRQSDQLN------AL---KSQGMKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKEAN-IKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAAGSG------------KIEA-AQYFDGKGEIPREDVATVLKEIVTSNHFNHQEFQII-SG-EQDIKDALTQFEIEKD |
| 1QYC Chain:A ((5-234)) | SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD-HAS-LVEAVKNVDVVISTVGSLQ-----------IESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79045 for 1553 contacts (-50.9/contact) +
2D Compatibility (PS) -22316 + (NN) -7553 + (LL) 664
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: -116650.0 ( -75.11 by residue)
QMean score : 0.484
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