Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MILKFDH-----IIHYIDQLD---RFSFPGDVI--------KLHSGGYHHKYGTFNKLGYINENYI-------------ELLDVENNEKLKKMAKTIE-GGVAFATQIVQEKYEQGFKNICLRTNDI--EAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDD----IYFRIEDGKVSK-----YHSVIIKDAQATSP--YSIFI---RGAIYRFEPLV--- |
| 2Y23 Chain:A ((6-312)) | TKEVVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKM-TFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKL--QDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y23.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35583 for 1531 contacts (-23.2/contact) +
2D Compatibility (PS) -27110 + (NN) 1033 + (LL) -44
1D Compatibility (HY) -14000 + (ID) 2300
Total energy: -78004.0 ( -50.95 by residue)
QMean score : 0.205
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