Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKHLQDHIQFLEQFINNVNALTAKMLKDLQNEYEISLEQSNVLGMLNKEPLTISEITQRQGVNKAAVSRRIKKLIDAKLVKLDKPNLNIDQRLKFITLTDKGRAYLKERNAIMTDIAQDITNDLNSEDIENVRQVLEVINHRIKTYSNHK
3KP2 Chain:B ((5-149))
----IEDHISFLEKFINDVNTLTAKLLKDLQTEYGISAEQSHVLNMLSIEALTVGQITEKQGVNKAAVSRRVKKLLNAELVKLEK----------IIKLSNKGKKYIKERKAIMSHIASDMTSDFDSKEIEKVRQVLEIIDYRIQSYTS--
General information:
TITO was launched using:
RESULT:
Template:
3KP2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43419 for 801 contacts (-54.2/contact) +
2D Compatibility (PS) -14674 + (NN) -5800 + (LL) 1080
1D Compatibility (HY) -18000 + (ID) 4250
Total energy: -85063.0 ( -106.20 by residue)
QMean score : 0.664
(partial model without unconserved sides chains):
PDB file :
Tito_3KP2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KP2-query.scw
PDB file :
Tito_Scwrl_3KP2.pdb
: