Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQ--NVANQLAQDSVKVVPTDVTNKEEVDELMKIAQQTFGGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPSDRKKLDPQDIAEAVLYALTQPKHVNVNEITVRPV
3P19 Chain:C ((17-248))
------KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQ------VDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLS------GGVLAADDVARAVLFAYQQPQNVCIREIALAP-
General information:
TITO was launched using:
RESULT:
Template:
3P19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107501 for 1787 contacts (-60.2/contact) +
2D Compatibility (PS) -22802 + (NN) -6039 + (LL) 1180
1D Compatibility (HY) -16000 + (ID) 4150
Total energy: -155312.0 ( -86.91 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3P19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P19-query.scw
PDB file :
Tito_Scwrl_3P19.pdb
: