Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRCAKKEDLNAILAIYNDAIINTTAVYTYKPQTIDERIAWFETKQRNHEPIFVFEENGSVLGFATFGSFRPWPAYQYTIEHSIYVDASARGKGIASQLLQRLIVEAKAKGYRTLVAGIDASNEASIKLHQKFNFKHAGTLTNVGYKFDYWLDLAFYELDLKD
4J3G Chain:B ((25-182))
LIRHATEADLPALLAIYNDAVENTLAIWNETLVDLENRHQWLENRNRDGFPVLVAEREGQVVGYASYGPFRPFEGFRHSSELSVYVASNARGGGIGRTLLAELIEEARERKVHVLIAGIEAGNAASIALHRSQGFEECGTLKQVGQKFGRWLDLLFMQ-----
General information:
TITO was launched using:
RESULT:
Template:
4J3G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94797 for 1126 contacts (-84.2/contact) +
2D Compatibility (PS) -17442 + (NN) -7150 + (LL) 264
1D Compatibility (HY) -14000 + (ID) 3500
Total energy: -136625.0 ( -121.34 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_4J3G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J3G-query.scw
PDB file :
Tito_Scwrl_4J3G.pdb
: