Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MKKTIMAS--------------SLAVALGVTGYAAGTG------HQAHAAEVNVDQAHLVDLAHNHQDQ---LNAAPIKDGAYDIHFVKDGFQYNFTSNGTTWSWSYEAANGQTAGFSNVAGADYTTSYNQGSDVQSVSYNAQSSNSNVEAVSAPTYHNYSTSTTSSSVRLSNGNTAGATGSSAAQIMAQRTGVSASTWAAIIARESNGQVNAYNPSGASGLFQTMPGWGPTNTVDQQINAAVKAYKAQGLGAWGF------------------------------- |
| 2P4Z Chain:A ((10-284)) | HGSVEVQVLIENVVFARNFVAEHGLSLLLKKGNKEIVVDTGQSENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERNPEVKIYTHKEILNKKYAMRKGG--------QFEEIGFDLSFYEKYKNNFVLIDKDAEIEEGFYVITN------TDITYDNEFTTKNFFVEKEGKRIPDKFLDEVFVVVKEEDGINVVTGCSH-AGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIARKIEEYGVKKVLTGHCTGIDEYGFLKSVLKDKISYLTTSSSIVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2700 for 1710 contacts (1.6/contact) +
2D Compatibility (PS) -23058 + (NN) -6505 + (LL) 1468
1D Compatibility (HY) -3600 + (ID) 1450
Total energy: -30445.0 ( -17.80 by residue)
QMean score : 0.122
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