Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLNTSNSPFTEKQVTEINNLLQTLTESQQQWLSGFLLANSNDTTSDSNQQQLETEVWQQSQISEEQATSTTYMLQNKEPHIEANQRHVTVLYGSESGNAMRLAEIFSERLSDIGHQVVLMSMDEYDTTNIAQLEDLFIITSTHGEGEPPDNAWDFFEFLEDDNAPNLNHVRYSVLALGDQTYEFFCQAGKDVDALLENLGAERICKRVDCDIDYEEDAEKWMADIINMIDTTSEGIQSESVISESIKSAKEKKYSKLNPYQAEVLANINLNGTDSNKETRHIEFLLDDFSESYEPGDCIVALPQNDPELVEKLISMLGWDPQSPVPINDRGDTVPIVEALTSHFEFTKLTLPLLKNADIYFDNEELSERIQDESWAREYVINRDFIDLITDFPTIELQPENMYQILRKLPPREYSISSSFMATPDEVHITVGTVRYQAHGRERKGVCSVHFAERIKPGDIVPIYLKKNPNFKFPMKQ-DIPVIMIGPGTGIAPFRAYL-----QEREELGMTGKTWLFFGDQHRSSDFLYEEEIEEWLEN-GNLTRVDLAFSRDQEH-KEYVQHRIMEESERFNEWIEQGAAIYICGDEKCMAKDVHQAIKDVLVKERHISQEEAELLLRQMKQQQRYQRDVY |
| 1JB9 Chain:A ((130-316)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNGVCS-NFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVAN-SDSLLYDEEFTSYLKQYPDNFRYDKALSREQK-GKMYVQDKIEEYSDEIFKLLDGGAHIYFCG-----LKGMMPGIQDTLKKVAERRGESWDQKLAQLKKNKQWHVEVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78809 for 1177 contacts (-67.0/contact) +
2D Compatibility (PS) -19292 + (NN) -12233 + (LL) 29592
1D Compatibility (HY) -12400 + (ID) 3150
Total energy: -96292.0 ( -81.81 by residue)
QMean score : 0.501
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