Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAHFLKI---VFLVGMCVSSLFAEGLEGFFNAL-EAQL--KSPIAKGILM---VIFIGIAIYVWRN-LDRWK---EILFTILGVVFGIFLFFKAPSLANWFMGVF
3M8E Chain:A ((-15-102))
----FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFYCAGYIDETRVGRSKIYTLSDLGVEIVECFKQKAMEMR-----
General information:
TITO was launched using:
RESULT:
Template:
3M8E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54703 for 503 contacts (-108.8/contact) +
2D Compatibility (PS) -8229 + (NN) 4136 + (LL) 860
1D Compatibility (HY) 4400 + (ID) 100
Total energy: -53636.0 ( -106.63 by residue)
QMean score : 0.114
(partial model without unconserved sides chains):
PDB file :
Tito_3M8E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M8E-query.scw
PDB file :
Tito_Scwrl_3M8E.pdb
: