Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MTSLFHLKFLKPLSCLQAGLLYSLI------FGVLYHFPLFAYVYKESN--------------------------------QVSFIAMIIIVLFCVNGALFLALGLISAYLMR---------------WSAIVFSWLNSVAFYFISAYKVF-LNKSMMG-------NVLNTNTHEVLGFLSVKLFVFIVVFGVLPGYVIYKIPLKNSSKK--APFLAI-LALVFI------------FIASAFMNAKNWLWF----------------------DKHAKFIGGLILPF--------AYSV-----NAFRVSALKFFAPTIKPLPLFSPNHSHSFVVLVIGESARKSNYALYGYEKPT-TPRLSKRLENHELTLFNATSCATYTTASLECILDSSFKN---------SLGAYENLPTYLTKAGVKVFWYSANDGEKNVKVTSYLK--NYELIQKCPNCEAIAPYDESLLYNL----PNLLKERSNEN---ILLILHLAGSHGPNYDNKVPLNFRVFKPYCSSADLSSCSKESLINAYDN-----------TIFYNDYLLDKIISMLENAKQPALMIYLSDHGESLG--EGAYYLHGIPKSIAPKEQYEIPFILYANDL----FKEK-----------------------------------------HSIIQT--QTPINQNTIFHSVLGVFEDFKTPSAVYRPS-----LDLLKHKKE--------------------------- |
| 4WRT Chain:B ((10-758)) | MNINPYFLFIDVPIQAAISTTFPYTGVPPYSHGTGTGYTIDTVIRTHEYSNKGKQYISDVTGCTMVDPTNGPLPEDNEPSAYAQLDCVLEALDRMDEEHPGLFQAASQNAMETLMVTTVDKLTQGRQTFDWTVCRNQPAATALNTTITSFRLNDLNGADKGGLIPFCQDIIDSLDRPEMTFFSVKNIKKKLPAKNRKGFLIKRIPMKVKDKITKVEYIKRALSLNTMTKDAERGKLKRRAIATAGIQIRGFVLVVENLAKNICENLEQSGLPVGGNEKKAKLSNAVAKMLSNCPPGGISMTVTGDNTKWNECLNPRIFLAMTERITRDSPIWFRDFCSIAPVLFSNKIARLGKGFMITSKTKRLKAQIPCPDLFSIPLERYNEETRAKLKKLKPFFNEEGTASLSPGMMMGMFNMLSTVLGVAALGI----KNIGNKEYLWDGLQSSDDFALFVNAKDEETCMEGINDFYRTCKLLGINMSKKKSYCNETGMFEFTSMFYRDGFVSNFAMELPSFGVAGVNESADMAIGMTIIKNNMINNGMGPATAQTAIQLFIADYRYTYKCHRGDSKVEGKRMKIIKELWENTKGRDGLLVADGGP-NIYNLRNLHIPEIVLKYNLMDPEYKGRLLHPQNPFVGHLSIEGIKEADITKMDYDAVSGTHSWRTKRNRSILNTDQRNMILEEQCYAKCCNLFEACFNSASYRKPVGQHSMLEAMAHRLRMDARLDYESGRMSKDDFEKAMAHLGEI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -211718 for 3383 contacts (-62.6/contact) +
2D Compatibility (PS) -53352 + (NN) -1274 + (LL) 416
1D Compatibility (HY) -13200 + (ID) 4550
Total energy: -283678.0 ( -83.85 by residue)
QMean score : 0.150
|
|
|