Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDFSQLGGLSGLLDGVKKEFSQLEEKNKDTIHTSKSGGGMVSVSFNGLGELVDLQIDDSLLEDKEAMQIYLMSALNDGYKAVEENRKNLAFNMLGNFAKL
2Y6Q Chain:D ((269-302))
-----------VVDFLLKEFSDWDERYKELIHTTLSFVGLATRIFPLEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADGKFNSIE
General information:
TITO was launched using:
RESULT:
Template:
2Y6Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1536 for 136 contacts (11.3/contact) +
2D Compatibility (PS) -3244 + (NN) 726 + (LL) 164
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -3868.0 ( -28.44 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_2Y6Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y6Q-query.scw
PDB file :
Tito_Scwrl_2Y6Q.pdb
: