Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNLLIQAENAIALLFLLNDKNLKGKIDLIYIDPPFATNNHFTITNGRATTISNSKNGDIAYSDKVVGMDFMEFLKQRLVLLKELLSEQGSIYVHTDYKIGHYVKVMLDEIFGIQNFRNEITRIKCNPKNFKRIGYGNIKDMILFYSKGKNPIFNEPKIPYTPQDLEKRFPKIDKDKRRYTTVPIHAPGEVESGECSKAFKGMLPPKGRHWRTDIATLERWDKEGLIEYSNNNNPRKKIYALEQVGKRVQDIWEFKDPQYPSYPTEKNAQLLDLIIKTSS-NKDSIVLDCFCGSGTTLKSAFLL---QRKFIGIDNSDLAIQACKNKLETIT--KDLFVSQNFYDFLVF |
| 3TMA Chain:A ((183-266)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRGSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TMA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22469 for 520 contacts (-43.2/contact) +
2D Compatibility (PS) -8764 + (NN) -6651 + (LL) 15536
1D Compatibility (HY) 1600 + (ID) 600
Total energy: -21348.0 ( -41.05 by residue)
QMean score : 0.378
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